VectorBase Gene Expression Browser: Ag.2L.100.0_CDS_at/M and S form virgin females (Cassone et al., 2008)

VectorBase

Get VectorBase Help

Sequence Data

Expression Data

Images

Population Data

IRbase

Documents

More...

Tools

Get Data

Forum

User

Home

Search:

Browse:

Experiments

Microarrays

Hybridisations

Samples

Help:

Tutorial

Documentation

FAQs

Help desk

Expert:

BASE2 login

Reporter Ag.2L.100.0_CDS_at → Experiment M and S form virgin females (Cassone et al., 2008)

←back to all experiments

Reporter details

Reporter ID	Associated gene(s)	Reporter annotation what's this?	Location(s)
Ag.2L.100.0_CDS_at	GPRMGL1 (AGAP006156)	putative metabotropic glutamate receptor 1	Anopheles gambiae genome

Expression summary

Experiment

P-value

Statistical test

Experimental factor

Summary

M and S form virgin females (Cassone et al., 2008)
experiment info

Data from one reporter: Ag.2L.100.0_CDS_at

0.28

ANOVA

Genotype

Non-significant differential expression
↑ M form
↓ S form

0.58

ANOVA

Genotype and strain or line

Non-significant differential expression
↑ M form:M-GA-CAM
↓ S form:Pimperena

Plot for experimental factor 'Genotype'

Export option: PDF

Plot data in tabular form

Genotype	mean	stdev	95% C.I. for the mean, x	min	median	max	n
M form	4.44	0.14	4.34 < x < 4.54	4.24	4.43	4.76	10
S form	4.36	0.17	4.23 < x < 4.49	4.07	4.31	4.60	9

Export options: CSV | XML

Plot for experimental factor 'Genotype:StrainOrLine'

Export option: PDF

Plot data in tabular form

Genotype:StrainOrLine	mean	stdev	95% C.I. for the mean, x	min	median	max	n
M form:M-GA-CAM	4.48	0.16	4.29 < x < 4.68	4.37	4.43	4.76	5
M form:Mali-NIH	4.39	0.12	4.25 < x < 4.53	4.24	4.44	4.51	5
S form:KIST	4.36	0.13	4.2 < x < 4.53	4.28	4.31	4.60	5
S form:Pimperena	4.35	0.23	3.99 < x < 4.71	4.07	4.37	4.58	4

Export options: CSV | XML

Spot data

19 items found, displaying all items.1

Hybridisation	Genotype	Genotype:StrainOrLine	Reporter	position	value
besansky_ms_NB01P001	M form	M form:M-GA-CAM	Ag.2L.100.0_CDS_at	1259	4.76
besansky_ms_NB01P008	S form	S form:KIST	Ag.2L.100.0_CDS_at	1259	4.60
besansky_ms_NB01P018	S form	S form:Pimperena	Ag.2L.100.0_CDS_at	1259	4.58
besansky_ms_NB01P011	M form	M form:Mali-NIH	Ag.2L.100.0_CDS_at	1259	4.51
besansky_ms_NB01P019	S form	S form:Pimperena	Ag.2L.100.0_CDS_at	1259	4.48
besansky_ms_NB01P014	M form	M form:Mali-NIH	Ag.2L.100.0_CDS_at	1259	4.47
besansky_ms_NB01P003	M form	M form:M-GA-CAM	Ag.2L.100.0_CDS_at	1259	4.45
besansky_ms_NB01P012	M form	M form:Mali-NIH	Ag.2L.100.0_CDS_at	1259	4.44
besansky_ms_NB01P004	M form	M form:M-GA-CAM	Ag.2L.100.0_CDS_at	1259	4.43
besansky_ms_NB01P002	M form	M form:M-GA-CAM	Ag.2L.100.0_CDS_at	1259	4.41
besansky_ms_NB01P005	M form	M form:M-GA-CAM	Ag.2L.100.0_CDS_at	1259	4.37
besansky_ms_NB01P009	S form	S form:KIST	Ag.2L.100.0_CDS_at	1259	4.34
besansky_ms_NB01P010	S form	S form:KIST	Ag.2L.100.0_CDS_at	1259	4.31
besansky_ms_NB01P013	M form	M form:Mali-NIH	Ag.2L.100.0_CDS_at	1259	4.30
besansky_ms_NB01P006	S form	S form:KIST	Ag.2L.100.0_CDS_at	1259	4.30
besansky_ms_NB01P007	S form	S form:KIST	Ag.2L.100.0_CDS_at	1259	4.28
besansky_ms_NB01P016	S form	S form:Pimperena	Ag.2L.100.0_CDS_at	1259	4.26
besansky_ms_NB01P015	M form	M form:Mali-NIH	Ag.2L.100.0_CDS_at	1259	4.24
besansky_ms_NB01P020	S form	S form:Pimperena	Ag.2L.100.0_CDS_at	1259	4.07

19 items found, displaying all items.1

Export options: CSV | XML